Office of Research Computing

Specialty Software Information

GraphPad Prism

Cost: Free to Yeshiva’s Einstein medical community. Site License is for Faculty and Staff computers at the Albert Einstein College of Medicine Resnick Campus. Also may be used on a single personal computer by Students for Yeshiva’s Einstein educational purposes only.

Access: Follow the instructions to activate Prism 6 license:
http://graphpad.com/support/faq/activating-a-prism-6-license/ 

Download Prism 6: http://graphpad.com/apps/index.cfm/register/subscription/ID/5391/subscription/XLQPYCJM  

Once you are prompted to enter the license key, contact the Helpdesk at 212-960-5294, or #6123 from any campus phone, during business hours.

If you are a Montefiore employee affiliated with Einstein such as a faculty member or conducting research, contact your Einstein Administrator, DBIT or Chair to obtain an Einstein email address. Only users with an Einstein email address will be eligible to register for the software.

Description: GraphPad Prism is scientific 2D graphing and statistics software. Features include statistical guidance for novices, analysis checklists review, nonlinear regression, live links (when data are edited or replaced, Prism automatically updates the results and graphs), and automatic error bars. Raw data (replicates) can be entered, and then plotted as mean with SD, SEM or confidence interval.

For more information visit: http://graphpad.com/prism/Prism.htm.

 

Mathematica

Cost: Free to YU community. Site License is for Faculty and Staff computers on the YU Campus. Also may be used on a single home computer by Faculty and Staff for YU educational purposes only.
Access: Staff and Faculty, please contact Help Desk at 212-960-5294 or #6123. Laboratory and classroom installations, please contact Academic Computing on your campus.
For home use,users must submit a request to Wolfram Research via email (site-program@wolfram.com) to request a copy of Mathematica. For further information click here.

Description: Mathematica is a high-level technical computing language and interactive environment for algorithm development, data visualization, data analysis, and numeric computation.

 

Matlab

If you wish to use MATLAB in the HPC Clusters, please contact Joseph Hargitai.

Cost: $500 per user (individual license from vendor)

Access: Please contact Debbi Cohen, MathWorks at 508-647-7057 for further information.

Description: MATLAB® serves as the foundation for all MathWorks™ products. It includes a programming language and tools for algorithm development, data analysis, data visualization, and numeric computation.

For more information visit: http://www.mathworks.com.

 

R - Statistics

Cost: Free
Access: Freely available from a CRAN mirror.

Description: R is an open-source software environment for statistical computing and graphics. It uses a command line interface, but graphical interfaces are also available. For more information visit: http://www.r-project.org.

 
 

SPSS - Statistics

Cost: Free to Yeshiva University’s community. Site License is for Faculty and Staff computers on any Yeshiva Campus.
Access: Yeshiva Staff and Faculty, please contact Help Desk at 212-960-5294. Laboratory and classroom installations, please contact Academic Computing on your campus.

Please note SPSS licenses are on a first come, first served basis. There is a limited number of licenses available.

Description: SPSS is among the most widely used programs for statistical analysis. Statistical analysis, data management, case selection, file reshaping, creating derived data, and data documentation are among many features of the base software, which includes descriptive statistics; bivariate statistics; prediction for numerical outcomes: prediction for identifying groups; and numerous other features. For further information about this package please visit http://www.spss.com/.

 
 

Ingenuity Pathway Analysis (IPA)

Vendor: Ingenuity Systems (http://www.ingenuity.com)
Local Contact: Eduardo Zaborowski, Ph.D.  

License: Einstein has a 3 concurrent user license.
Access: Go to https://analysis.ingenuity.com/pa/account/signup.html and fill out all required information. 

Description: IPA allows the researcher to explore molecular interactions, create custom molecular pathways, and view and modify metabolic, signaling, and toxicological canonical pathways. It can provide layering of additional information, such as drugs, disease genes, expression data, cellular functions and processes, or a researcher’s own genes or chemicals of interest. IPA has an Integration Module allowing experienced programmers to call the IPA application from within other programs.

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